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COVID19 Virtual BioHackathon 2020 Kick-off meeting (05/04/2020)
COVID19 Virtual BioHackathon 2020 was held in April 5th-11th 2020. The goal of the biohackathon is to create a cohesive effort and work on tooling for COVID-19 analysis. The biohackathon will lead to more readily accessible data, protocols, detection kits, protein predictions etc. Over the internet we are forming groups with topics to work on. There will be working groups for FAIR data, workflows and pipelines, pangenomes and variation graphs, machine learning, text mining and visualisations. You can create your own group and get people interested in your area of work. We will use video conferencing, E-mail, IRC, messaging, wiki's and source code repositories to make it all happen.
On the first day of the hackathon (Apr. 5th, 2020), a kick-off meeting (online video conference) was held to give an overview of each topic (1:17:33). This meeting was organized by Layla Jael Garcia-Castro, Tazro Ohta, Jennifer Harrow, Pjotr Prins (The COVID19 Virtual BioHackathon 2020 Organizers).
All talks in COVID19 Virtual BioHackathon 2020 are listed in the YouTube list.
On the first day of the hackathon (Apr. 5th, 2020), a kick-off meeting (online video conference) was held to give an overview of each topic (1:17:33). This meeting was organized by Layla Jael Garcia-Castro, Tazro Ohta, Jennifer Harrow, Pjotr Prins (The COVID19 Virtual BioHackathon 2020 Organizers).
All talks in COVID19 Virtual BioHackathon 2020 are listed in the YouTube list.
見どころダイジェスト
- 01:55 1. Welcoming and Introduction
- 02:51 2. Communication channels
- 07:20 3. BioHackrxiv
- 09:32 4. Code of conduct
- 11:37 5. FAIR DATA
- 13:44 6. Ontology
- 16:26 7. Pangenome
- 18:21 8. Pangenome browser
- 20:13 9. Workflow
- 22:16 10. Workflow HUB
- 25:21 11. Machine learning
- 28:00 12. Knowledge graph
- 30:13 13. Text mining and analysis
- 31:31 14. Wikidata
- 34:23 15. Bio statistics
- 37:27 16. Annotation on structures
- 40:56 18. Translation
- 42:51 19. Web development: Serratus
- 44:47 20. Scientific software packaging using Debian
- 45:58 21. Gene expression
- 47:54 22. Clinical and translational medical data
- 51:13 23. Home learning
- 52:54 24. Public sequence resource
- 54:45 25. Available resources
- 01:05:19 26. Other way to contribute
- 01:11:00 27. Acknowledgements
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200407_COVID19-vBH_kickoff.mov