EBI Roadshow at DBCLS - Access to Genes and Genomes with Ensembl
The purpose of the roadshow is to train experimental biologists how to make the most of some of Europe's most widely used public biological databases, such as Ensembl, ArrayExpress, BioMart, Expression Atlas and Reactome. The roadshow combines presentations and hands-on practical sessions. Trainees are guided through the selected databases and tools by expert trainers from the European Bioinformatics Institute (EBI), the Swiss Institute of Bioinformatics (SBI), the European Patent Office (EPO) and the BRENDA project. More information is available on the Bioinformatics Roadshow website.On the first day of the Bioinformatics Roadshow (Sep. 5) in Japan, the lecture and exercises were held at DBCLS. In this talk, Jana Vandrovcova makes a presentation entitled "Access to Genes and Genomes with Ensembl".
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見どころダイジェスト
00:321. Introduction to EBI: overview of most relevant databases
36:552. Origin, goals, data and analysis in the Ensembl project Website Walkthrough
01:09:003. Retrieving datasets using the data mining tool BioMart
01:25:094. Comparative genomics and proteomics: orthologues, protein families, whole genome alignments and syntenic regions
01:57:595. Variations: Single nucleotide polymorphisms in Ensembl, comparison of strains, breeds, individuals using the browser and BioMart